Retinex


Retinex (java & class files) This plugin is a modified implementation of the Retinex filter from the GIMP pacakge. Retinex filtering is based on Land's theory of image perception, proposed to explain the perceived colour constancy of objects under varying illumination conditions. Several approaches exist to implement the retinex principles, among these the multiscale retinex with colour restoration algorithm (MSRCR) combines colour constancy with local contrast enhancement so images are rendered similarly to how human vision is believed to operate. Unfortunately, there appears to be a bug in the GIMP filter, specifically in the implementation of the linear Gaussian filter. The bug was avoided here by replacing the original linear Gaussian filter routine with the built-in Gaussian filter of ImageJ.

The ImageJ plugin was written by Francisco Jiménez Hernández (UAEMex) jimenezf at  fi.uaemex.mx  during a research visit to Birmingham University, School of Dentistry.

Use 

Copy the java and class fles to the /plugins folder or subfolder and run Help>Refresh Menus. A new Retinex entry should appear in the plugins menu or submenu. In Fiji, you might need to move the *.java file somewhere else.
The plugin expects an RGB image or stack.

Level specifies distribution of the Gaussian blurring kernel sizes for Scale division values > 2:
Uniform tends to treat all image intensities similarly,
Low enhances dark regions of the image,
High enhances the bright regions of the image.

Scale
specifies the depth of the retinex effect.

Scale division
specifies the number of iterations of the multiscale filter. Values larger than 2 exploit the "multiscale" nature of the algorithm.

Dynamic
adjusts the colour of the result. Large values produce less saturated images..

References


Examples

  Histological image restoration with retinex
Left: original histological image of human epithelium stained with haematoxylin and eosin. Right: image restored with retinex algorithm "low" setting.

  original restoration with retinex
Left: original image. Right: image restored with retinex algorithm "uniform" setting. Note the restoration of the colours despite the overall cyan tone of the original.

  orignal restoration wtih retinex
Left: original image (courtesy of AD Walmsley) with dark shadows and bright areas. Right: image restored with retinex algorithm "low" setting. Note the shadowed regions become more visible.



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Last updated on 19/Jul/2010.